Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Gm4968-201ENSMUST00000071458 858 ntBASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox30Q8CGW4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Dancr-204ENSMUST00000132389 2347 ntBASIC18.94■□□□□ 0.62
Sox30Q8CGW4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox30Q8CGW4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Gm2559-201ENSMUST00000201323 363 ntBASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox30Q8CGW4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Gm42569-201ENSMUST00000200539 472 ntBASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox30Q8CGW4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Gm5408-201ENSMUST00000197998 747 ntBASIC18.9■□□□□ 0.62
Sox30Q8CGW4 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms