Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Gm22697-201ENSMUST00000175194 63 ntBASIC21.35■■□□□ 1.01
Smc4Q8CG47 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.35■■□□□ 1.01
Smc4Q8CG47 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc4Q8CG47 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Grk6-206ENSMUST00000224995 2971 ntBASIC21.34■■□□□ 1.01
Smc4Q8CG47 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.34■■□□□ 1.01
Smc4Q8CG47 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc4Q8CG47 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Smc4Q8CG47 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc4Q8CG47 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.33■■□□□ 1
Smc4Q8CG47 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smc4Q8CG47 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smc4Q8CG47 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc4Q8CG47 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.32■■□□□ 1
Smc4Q8CG47 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Smc4Q8CG47 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Smc4Q8CG47 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Smc4Q8CG47 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc4Q8CG47 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Smc4Q8CG47 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc4Q8CG47 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smc4Q8CG47 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.31■■□□□ 1
Smc4Q8CG47 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.31■■□□□ 1
Smc4Q8CG47 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Smc4Q8CG47 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
Smc4Q8CG47 Gm7370-201ENSMUST00000219471 767 ntBASIC21.31■■□□□ 1
Smc4Q8CG47 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Smc4Q8CG47 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.31■■□□□ 1
Smc4Q8CG47 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Smc4Q8CG47 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc4Q8CG47 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.3■■□□□ 1
Smc4Q8CG47 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms