Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Gm27741-201ENSMUST00000185060 237 ntBASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Trim52Q8CDV4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim52Q8CDV4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim52Q8CDV4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.42■■□□□ 1.02
Trim52Q8CDV4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim52Q8CDV4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim52Q8CDV4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim52Q8CDV4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim52Q8CDV4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Trim52Q8CDV4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim52Q8CDV4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Gm6623-201ENSMUST00000173570 544 ntBASIC21.4■■□□□ 1.02
Trim52Q8CDV4 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim52Q8CDV4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trim52Q8CDV4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim52Q8CDV4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Gm28033-201ENSMUST00000184224 96 ntBASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Gm17807-201ENSMUST00000186869 298 ntBASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim52Q8CDV4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim52Q8CDV4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Gm17971-201ENSMUST00000190239 806 ntBASIC21.37■■□□□ 1.01
Trim52Q8CDV4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim52Q8CDV4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms