Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Aph1bQ8C7N7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.13■□□□□ 0.33
Aph1bQ8C7N7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Gm18025-201ENSMUST00000221733 862 ntBASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aph1bQ8C7N7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Gm13158-201ENSMUST00000122007 736 ntBASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Gm42545-201ENSMUST00000202755 922 ntBASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aph1bQ8C7N7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aph1bQ8C7N7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms