Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ska3Q8C263 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.28■□□□□ 0.2
Ska3Q8C263 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ska3Q8C263 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ska3Q8C263 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ska3Q8C263 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ska3Q8C263 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ska3Q8C263 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.27■□□□□ 0.2
Ska3Q8C263 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Ska3Q8C263 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.27■□□□□ 0.2
Ska3Q8C263 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ska3Q8C263 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.27■□□□□ 0.2
Ska3Q8C263 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ska3Q8C263 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ska3Q8C263 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ska3Q8C263 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ska3Q8C263 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ska3Q8C263 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ska3Q8C263 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ska3Q8C263 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ska3Q8C263 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ska3Q8C263 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ska3Q8C263 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ska3Q8C263 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.26■□□□□ 0.19
Ska3Q8C263 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.26■□□□□ 0.19
Ska3Q8C263 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.26■□□□□ 0.19
Ska3Q8C263 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ska3Q8C263 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ska3Q8C263 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ska3Q8C263 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ska3Q8C263 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.26■□□□□ 0.19
Ska3Q8C263 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.26■□□□□ 0.19
Ska3Q8C263 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ska3Q8C263 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ska3Q8C263 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Ska3Q8C263 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ska3Q8C263 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ska3Q8C263 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ska3Q8C263 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.25■□□□□ 0.19
Ska3Q8C263 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.25■□□□□ 0.19
Ska3Q8C263 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.25■□□□□ 0.19
Ska3Q8C263 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ska3Q8C263 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ska3Q8C263 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ska3Q8C263 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ska3Q8C263 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ska3Q8C263 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ska3Q8C263 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.25■□□□□ 0.19
Ska3Q8C263 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ska3Q8C263 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.24■□□□□ 0.19
Ska3Q8C263 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.24■□□□□ 0.19
Ska3Q8C263 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Timm23-208ENSMUST00000226683 750 ntBASIC16.24■□□□□ 0.19
Ska3Q8C263 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ska3Q8C263 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ska3Q8C263 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.24■□□□□ 0.19
Ska3Q8C263 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ska3Q8C263 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.24■□□□□ 0.19
Ska3Q8C263 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ska3Q8C263 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ska3Q8C263 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ska3Q8C263 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ska3Q8C263 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ska3Q8C263 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ska3Q8C263 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms