Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Gm11927-201ENSMUST00000118472 759 ntBASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Gm12933-201ENSMUST00000120203 872 ntBASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim4Q8C1Q6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smim4Q8C1Q6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smim4Q8C1Q6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smim4Q8C1Q6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.52□□□□□ -0.08
Smim4Q8C1Q6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smim4Q8C1Q6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Gm5408-201ENSMUST00000197998 747 ntBASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smim4Q8C1Q6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Mir2861-201ENSMUST00000175539 82 ntBASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smim4Q8C1Q6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Gm2559-201ENSMUST00000201323 363 ntBASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Gm4968-201ENSMUST00000071458 858 ntBASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smim4Q8C1Q6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smim4Q8C1Q6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smim4Q8C1Q6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smim4Q8C1Q6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.49□□□□□ -0.09
Smim4Q8C1Q6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.49□□□□□ -0.09
Smim4Q8C1Q6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms