Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cps1Q8C196 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cps1Q8C196 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cps1Q8C196 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cps1Q8C196 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cps1Q8C196 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cps1Q8C196 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC23.34■■□□□ 1.33
Cps1Q8C196 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Cps1Q8C196 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cps1Q8C196 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44357-201ENSMUST00000195897 142 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm19658-201ENSMUST00000196231 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44367-201ENSMUST00000196836 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44350-201ENSMUST00000197197 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44390-201ENSMUST00000197533 144 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44313-201ENSMUST00000198018 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44486-201ENSMUST00000198508 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44454-201ENSMUST00000198541 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44314-201ENSMUST00000199263 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44394-201ENSMUST00000199558 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44484-201ENSMUST00000199873 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44466-201ENSMUST00000200264 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm44359-201ENSMUST00000200671 138 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC23.33■■□□□ 1.32
Cps1Q8C196 AC161829.1-201ENSMUST00000220298 281 ntBASIC23.33■■□□□ 1.32
Cps1Q8C196 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Cps1Q8C196 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC23.32■■□□□ 1.32
Cps1Q8C196 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
Cps1Q8C196 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC23.32■■□□□ 1.32
Cps1Q8C196 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC23.32■■□□□ 1.32
Cps1Q8C196 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Cps1Q8C196 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cps1Q8C196 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Cps1Q8C196 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Cps1Q8C196 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC23.31■■□□□ 1.32
Cps1Q8C196 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC23.31■■□□□ 1.32
Cps1Q8C196 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Gm10052-201ENSMUST00000168019 960 ntBASIC23.31■■□□□ 1.32
Cps1Q8C196 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Gm7729-201ENSMUST00000050143 801 ntBASIC23.31■■□□□ 1.32
Cps1Q8C196 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cps1Q8C196 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC23.3■■□□□ 1.32
Cps1Q8C196 Gm12644-201ENSMUST00000119935 606 ntBASIC23.3■■□□□ 1.32
Cps1Q8C196 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
Cps1Q8C196 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC23.3■■□□□ 1.32
Cps1Q8C196 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC23.3■■□□□ 1.32
Cps1Q8C196 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cps1Q8C196 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cps1Q8C196 Gm7935-201ENSMUST00000100555 1278 ntBASIC23.29■■□□□ 1.32
Cps1Q8C196 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC23.29■■□□□ 1.32
Cps1Q8C196 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Cps1Q8C196 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
Cps1Q8C196 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cps1Q8C196 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cps1Q8C196 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cps1Q8C196 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms