Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Gm8520-201ENSMUST00000186517 868 ntBASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trub1Q8C0D0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trub1Q8C0D0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trub1Q8C0D0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trub1Q8C0D0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trub1Q8C0D0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trub1Q8C0D0 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.83■□□□□ 0.45
Trub1Q8C0D0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trub1Q8C0D0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trub1Q8C0D0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trub1Q8C0D0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trub1Q8C0D0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.83■□□□□ 0.44
Trub1Q8C0D0 Gm27011-201ENSMUST00000182352 972 ntBASIC17.83■□□□□ 0.44
Trub1Q8C0D0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trub1Q8C0D0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.83■□□□□ 0.44
Trub1Q8C0D0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trub1Q8C0D0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trub1Q8C0D0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trub1Q8C0D0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trub1Q8C0D0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trub1Q8C0D0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trub1Q8C0D0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.81■□□□□ 0.44
Trub1Q8C0D0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.8■□□□□ 0.44
Trub1Q8C0D0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
Trub1Q8C0D0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trub1Q8C0D0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trub1Q8C0D0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trub1Q8C0D0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trub1Q8C0D0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trub1Q8C0D0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms