Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Mir770-201ENSMUST00000103252 94 ntBASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Mir6956-201ENSMUST00000183598 62 ntBASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Gm7862-201ENSMUST00000121461 292 ntBASIC13.65□□□□□ -0.22
Chd9Q8BYH8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd9Q8BYH8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd9Q8BYH8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Gm6376-201ENSMUST00000209407 580 ntBASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Gm4974-201ENSMUST00000209974 875 ntBASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd9Q8BYH8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Chd9Q8BYH8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms