Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tcaf1Q8BNE1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcaf1Q8BNE1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Gm13836-201ENSMUST00000121159 501 ntBASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcaf1Q8BNE1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Gm2274-201ENSMUST00000184539 609 ntBASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tcaf1Q8BNE1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Gm10231-201ENSMUST00000181584 441 ntBASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Gm10175-202ENSMUST00000208752 441 ntBASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcaf1Q8BNE1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.65■□□□□ 0.58
Tcaf1Q8BNE1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms