Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Ckap4Q8BMK4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Gm2399-201ENSMUST00000104944 225 ntBASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Gm44549-201ENSMUST00000208351 577 ntBASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ckap4Q8BMK4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ckap4Q8BMK4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ckap4Q8BMK4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ckap4Q8BMK4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Flg-201ENSMUST00000050758 1488 ntBASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms