Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.42■□□□□ 0.54
Smarcal1Q8BJL0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcal1Q8BJL0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smarcal1Q8BJL0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcal1Q8BJL0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Gm10566-201ENSMUST00000086739 996 ntBASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcal1Q8BJL0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Idnk-204ENSMUST00000226010 1898 ntBASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smarcal1Q8BJL0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.39■□□□□ 0.54
Smarcal1Q8BJL0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smarcal1Q8BJL0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Gm37722-201ENSMUST00000193757 208 ntBASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Gm45328-201ENSMUST00000210942 917 ntBASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcal1Q8BJL0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcal1Q8BJL0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Gm6623-201ENSMUST00000173570 544 ntBASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcal1Q8BJL0 Rarb-207ENSMUST00000225921 2756 ntBASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Gm7153-201ENSMUST00000117092 455 ntBASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms