Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SynbQ8BI41 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SynbQ8BI41 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.5■□□□□ 0.23
SynbQ8BI41 Gm18959-201ENSMUST00000208954 655 ntBASIC16.5■□□□□ 0.23
SynbQ8BI41 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SynbQ8BI41 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SynbQ8BI41 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.49■□□□□ 0.23
SynbQ8BI41 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.49■□□□□ 0.23
SynbQ8BI41 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.49■□□□□ 0.23
SynbQ8BI41 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.49■□□□□ 0.23
SynbQ8BI41 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SynbQ8BI41 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SynbQ8BI41 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SynbQ8BI41 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.48■□□□□ 0.23
SynbQ8BI41 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SynbQ8BI41 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SynbQ8BI41 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SynbQ8BI41 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SynbQ8BI41 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.47■□□□□ 0.23
SynbQ8BI41 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.47■□□□□ 0.23
SynbQ8BI41 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.47■□□□□ 0.23
SynbQ8BI41 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SynbQ8BI41 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.46■□□□□ 0.23
SynbQ8BI41 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.46■□□□□ 0.23
SynbQ8BI41 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SynbQ8BI41 Gm27463-201ENSMUST00000183569 57 ntBASIC16.46■□□□□ 0.23
SynbQ8BI41 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.46■□□□□ 0.23
SynbQ8BI41 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.46■□□□□ 0.23
SynbQ8BI41 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SynbQ8BI41 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SynbQ8BI41 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SynbQ8BI41 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SynbQ8BI41 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SynbQ8BI41 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynbQ8BI41 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynbQ8BI41 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.45■□□□□ 0.22
SynbQ8BI41 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynbQ8BI41 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynbQ8BI41 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SynbQ8BI41 Gm10013-201ENSMUST00000106074 672 ntBASIC16.45■□□□□ 0.22
SynbQ8BI41 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.45■□□□□ 0.22
SynbQ8BI41 Gm23634-201ENSMUST00000175071 91 ntBASIC16.45■□□□□ 0.22
SynbQ8BI41 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynbQ8BI41 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynbQ8BI41 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms