Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf38Q8BI21 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf38Q8BI21 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.69■□□□□ 0.26
Rnf38Q8BI21 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Rab3c-203ENSMUST00000224180 967 ntBASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf38Q8BI21 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.68■□□□□ 0.26
Rnf38Q8BI21 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf38Q8BI21 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Gm5408-201ENSMUST00000197998 747 ntBASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf38Q8BI21 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms