Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn3bQ8BHK2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn3bQ8BHK2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn3bQ8BHK2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scn3bQ8BHK2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn3bQ8BHK2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn3bQ8BHK2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn3bQ8BHK2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Gm13241-201ENSMUST00000094493 780 ntBASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn3bQ8BHK2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Scn3bQ8BHK2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Scn3bQ8BHK2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Scn3bQ8BHK2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Gm9988-201ENSMUST00000069786 435 ntBASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.14■□□□□ 0.17
Scn3bQ8BHK2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn3bQ8BHK2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn3bQ8BHK2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms