Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn3Q8BHH8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Haglr-201ENSMUST00000100000 2085 ntBASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Gm10653-202ENSMUST00000139570 835 ntBASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.23■□□□□ 0.19
Clrn3Q8BHH8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Gm15378-201ENSMUST00000121894 207 ntBASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Gm8520-201ENSMUST00000186517 868 ntBASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Gm18025-201ENSMUST00000221733 862 ntBASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Idnk-204ENSMUST00000226010 1898 ntBASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn3Q8BHH8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn3Q8BHH8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clrn3Q8BHH8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clrn3Q8BHH8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Clrn3Q8BHH8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms