Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx42Q810A7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.59■□□□□ 0.41
Ddx42Q810A7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.59■□□□□ 0.41
Ddx42Q810A7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.59■□□□□ 0.41
Ddx42Q810A7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx42Q810A7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx42Q810A7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx42Q810A7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx42Q810A7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx42Q810A7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ddx42Q810A7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.58■□□□□ 0.41
Ddx42Q810A7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.58■□□□□ 0.4
Ddx42Q810A7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.58■□□□□ 0.4
Ddx42Q810A7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.58■□□□□ 0.4
Ddx42Q810A7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.58■□□□□ 0.4
Ddx42Q810A7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.58■□□□□ 0.4
Ddx42Q810A7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx42Q810A7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.57■□□□□ 0.4
Ddx42Q810A7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ddx42Q810A7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx42Q810A7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.55■□□□□ 0.4
Ddx42Q810A7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx42Q810A7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx42Q810A7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms