Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Gm11249-201ENSMUST00000117071 859 ntBASIC18.54■□□□□ 0.56
Nucks1Q80XU3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nucks1Q80XU3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nucks1Q80XU3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Nucks1Q80XU3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nucks1Q80XU3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nucks1Q80XU3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nucks1Q80XU3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.52■□□□□ 0.55
Nucks1Q80XU3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nucks1Q80XU3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nucks1Q80XU3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nucks1Q80XU3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Nucks1Q80XU3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Gm13158-201ENSMUST00000122007 736 ntBASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Gm6576-201ENSMUST00000169678 883 ntBASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nucks1Q80XU3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nucks1Q80XU3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms