Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim36Q80WG7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim36Q80WG7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim36Q80WG7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim36Q80WG7 Gm10252-201ENSMUST00000209541 832 ntBASIC16.73■□□□□ 0.27
Trim36Q80WG7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim36Q80WG7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim36Q80WG7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim36Q80WG7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim36Q80WG7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim36Q80WG7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim36Q80WG7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Gm22325-201ENSMUST00000158904 308 ntBASIC16.72■□□□□ 0.27
Trim36Q80WG7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.72■□□□□ 0.27
Trim36Q80WG7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim36Q80WG7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim36Q80WG7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim36Q80WG7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim36Q80WG7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim36Q80WG7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim36Q80WG7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.71■□□□□ 0.26
Trim36Q80WG7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim36Q80WG7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.69■□□□□ 0.26
Trim36Q80WG7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms