Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Usp8Q80U87 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp8Q80U87 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp8Q80U87 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.37■□□□□ 0.37
Usp8Q80U87 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp8Q80U87 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp8Q80U87 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp8Q80U87 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp8Q80U87 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp8Q80U87 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp8Q80U87 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp8Q80U87 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp8Q80U87 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Usp8Q80U87 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp8Q80U87 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.37■□□□□ 0.37
Usp8Q80U87 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Usp8Q80U87 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp8Q80U87 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp8Q80U87 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp8Q80U87 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp8Q80U87 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Usp8Q80U87 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Usp8Q80U87 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp8Q80U87 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp8Q80U87 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp8Q80U87 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp8Q80U87 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp8Q80U87 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp8Q80U87 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp8Q80U87 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp8Q80U87 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp8Q80U87 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Usp8Q80U87 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.34■□□□□ 0.37
Usp8Q80U87 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp8Q80U87 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.34■□□□□ 0.37
Usp8Q80U87 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp8Q80U87 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp8Q80U87 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp8Q80U87 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp8Q80U87 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp8Q80U87 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp8Q80U87 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp8Q80U87 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp8Q80U87 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp8Q80U87 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Usp8Q80U87 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.33■□□□□ 0.36
Usp8Q80U87 Gm10418-201ENSMUST00000100943 576 ntBASIC17.33■□□□□ 0.36
Usp8Q80U87 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp8Q80U87 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.33■□□□□ 0.36
Usp8Q80U87 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.33■□□□□ 0.36
Usp8Q80U87 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.33■□□□□ 0.36
Usp8Q80U87 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.33■□□□□ 0.36
Usp8Q80U87 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Usp8Q80U87 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp8Q80U87 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp8Q80U87 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Usp8Q80U87 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp8Q80U87 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.33■□□□□ 0.36
Usp8Q80U87 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp8Q80U87 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp8Q80U87 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp8Q80U87 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp8Q80U87 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp8Q80U87 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms