Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh19Q80TF3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh19Q80TF3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh19Q80TF3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh19Q80TF3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh19Q80TF3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh19Q80TF3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Pcdh19Q80TF3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Gm16061-201ENSMUST00000122167 857 ntBASIC17■□□□□ 0.31
Pcdh19Q80TF3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Gm7791-201ENSMUST00000219066 539 ntBASIC17■□□□□ 0.31
Pcdh19Q80TF3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh19Q80TF3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Gm10013-201ENSMUST00000106074 672 ntBASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Gm13474-201ENSMUST00000122466 815 ntBASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh19Q80TF3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh19Q80TF3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh19Q80TF3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms