Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Gm9103-201ENSMUST00000119371 405 ntBASIC15.96■□□□□ 0.15
Pif1Q80SX8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Ank2-226ENSMUST00000189368 339 ntBASIC15.96■□□□□ 0.15
Pif1Q80SX8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pif1Q80SX8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pif1Q80SX8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Pif1Q80SX8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pif1Q80SX8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.95■□□□□ 0.14
Pif1Q80SX8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Gm27389-201ENSMUST00000183622 195 ntBASIC15.95■□□□□ 0.14
Pif1Q80SX8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pif1Q80SX8 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.95■□□□□ 0.14
Pif1Q80SX8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Gm7284-201ENSMUST00000131667 944 ntBASIC15.94■□□□□ 0.14
Pif1Q80SX8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pif1Q80SX8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Gm29791-202ENSMUST00000207888 369 ntBASIC15.94■□□□□ 0.14
Pif1Q80SX8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.94■□□□□ 0.14
Pif1Q80SX8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pif1Q80SX8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pif1Q80SX8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Gm17661-201ENSMUST00000170317 270 ntBASIC15.93■□□□□ 0.14
Pif1Q80SX8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Gm21559-201ENSMUST00000220638 855 ntBASIC15.93■□□□□ 0.14
Pif1Q80SX8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Gm8587-201ENSMUST00000076538 843 ntBASIC15.93■□□□□ 0.14
Pif1Q80SX8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pif1Q80SX8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pif1Q80SX8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms