Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn10aQ6QIY3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn10aQ6QIY3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn10aQ6QIY3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scn10aQ6QIY3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scn10aQ6QIY3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scn10aQ6QIY3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn10aQ6QIY3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Scn10aQ6QIY3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn10aQ6QIY3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn10aQ6QIY3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Scn10aQ6QIY3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn10aQ6QIY3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Fst-202ENSMUST00000223640 2612 ntBASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Mir5126-201ENSMUST00000175513 77 ntBASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Rprl3-201ENSMUST00000157400 290 ntBASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.63■□□□□ 0.73
Scn10aQ6QIY3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Gm37935-201ENSMUST00000192012 982 ntBASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn10aQ6QIY3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn10aQ6QIY3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn10aQ6QIY3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms