Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rif1Q6PR54 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rif1Q6PR54 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.58□□□□□ -0.08
Rif1Q6PR54 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.58□□□□□ -0.08
Rif1Q6PR54 Gm8396-201ENSMUST00000057361 823 ntBASIC14.58□□□□□ -0.08
Rif1Q6PR54 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.58□□□□□ -0.08
Rif1Q6PR54 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rif1Q6PR54 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Mir3113-201ENSMUST00000175478 76 ntBASIC14.57□□□□□ -0.08
Rif1Q6PR54 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.57□□□□□ -0.08
Rif1Q6PR54 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rif1Q6PR54 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Gm14127-201ENSMUST00000117906 678 ntBASIC14.56□□□□□ -0.08
Rif1Q6PR54 Gm11424-201ENSMUST00000121929 829 ntBASIC14.56□□□□□ -0.08
Rif1Q6PR54 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.56□□□□□ -0.08
Rif1Q6PR54 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.56□□□□□ -0.08
Rif1Q6PR54 Il3ra-202ENSMUST00000223589 738 ntBASIC14.56□□□□□ -0.08
Rif1Q6PR54 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rif1Q6PR54 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.55□□□□□ -0.08
Rif1Q6PR54 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Gm27867-201ENSMUST00000184778 125 ntBASIC14.55□□□□□ -0.08
Rif1Q6PR54 Gm6089-201ENSMUST00000197666 938 ntBASIC14.55□□□□□ -0.08
Rif1Q6PR54 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Rif1Q6PR54 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.55□□□□□ -0.08
Rif1Q6PR54 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rif1Q6PR54 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Mir7023-201ENSMUST00000185093 64 ntBASIC14.54□□□□□ -0.08
Rif1Q6PR54 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms