Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt39Q6IFX4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Krt39Q6IFX4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krt39Q6IFX4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krt39Q6IFX4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krt39Q6IFX4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
Krt39Q6IFX4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Gm5408-201ENSMUST00000197998 747 ntBASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt39Q6IFX4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt39Q6IFX4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Haglr-201ENSMUST00000100000 2085 ntBASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.12■□□□□ 0.65
Krt39Q6IFX4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt39Q6IFX4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.11■□□□□ 0.65
Krt39Q6IFX4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt39Q6IFX4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms