Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt42Q6IFX2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt42Q6IFX2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Krt42Q6IFX2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt42Q6IFX2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Krt42Q6IFX2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Krt42Q6IFX2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Krt42Q6IFX2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Krt42Q6IFX2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Krt42Q6IFX2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Krt42Q6IFX2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Krt42Q6IFX2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.83■□□□□ 0.44
Krt42Q6IFX2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.83■□□□□ 0.44
Krt42Q6IFX2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt42Q6IFX2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt42Q6IFX2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt42Q6IFX2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Gm43060-201ENSMUST00000200621 289 ntBASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.82■□□□□ 0.44
Krt42Q6IFX2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt42Q6IFX2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.8■□□□□ 0.44
Krt42Q6IFX2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Gm27454-201ENSMUST00000185090 204 ntBASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Krt42Q6IFX2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Gm13241-201ENSMUST00000094493 780 ntBASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt42Q6IFX2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms