Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.53■□□□□ 0.88
Ltn1Q6A009 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.52■□□□□ 0.88
Ltn1Q6A009 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ltn1Q6A009 Gm11336-201ENSMUST00000118168 334 ntBASIC20.52■□□□□ 0.88
Ltn1Q6A009 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.52■□□□□ 0.88
Ltn1Q6A009 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ltn1Q6A009 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ltn1Q6A009 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ltn1Q6A009 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ltn1Q6A009 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.5■□□□□ 0.87
Ltn1Q6A009 Iqck-206ENSMUST00000208658 2891 ntBASIC20.5■□□□□ 0.87
Ltn1Q6A009 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ltn1Q6A009 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.49■□□□□ 0.87
Ltn1Q6A009 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ltn1Q6A009 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.49■□□□□ 0.87
Ltn1Q6A009 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ltn1Q6A009 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ltn1Q6A009 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ltn1Q6A009 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ltn1Q6A009 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ltn1Q6A009 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ltn1Q6A009 Gm43347-201ENSMUST00000200226 580 ntBASIC20.49■□□□□ 0.87
Ltn1Q6A009 Phf7-203ENSMUST00000226565 1971 ntBASIC20.48■□□□□ 0.87
Ltn1Q6A009 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ltn1Q6A009 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.48■□□□□ 0.87
Ltn1Q6A009 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ltn1Q6A009 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.48■□□□□ 0.87
Ltn1Q6A009 Gm18421-201ENSMUST00000204122 625 ntBASIC20.48■□□□□ 0.87
Ltn1Q6A009 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ltn1Q6A009 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ltn1Q6A009 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ltn1Q6A009 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ltn1Q6A009 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ltn1Q6A009 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ltn1Q6A009 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ltn1Q6A009 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ltn1Q6A009 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.46■□□□□ 0.87
Ltn1Q6A009 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ltn1Q6A009 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms