Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atg9aQ68FE2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atg9aQ68FE2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atg9aQ68FE2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Atg9aQ68FE2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Actl10-202ENSMUST00000226583 1501 ntBASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atg9aQ68FE2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg9aQ68FE2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Gm6345-202ENSMUST00000180900 204 ntBASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Gm27000-201ENSMUST00000182943 842 ntBASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atg9aQ68FE2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atg9aQ68FE2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Atg9aQ68FE2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atg9aQ68FE2 Rarb-207ENSMUST00000225921 2756 ntBASIC20.83■□□□□ 0.92
Atg9aQ68FE2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atg9aQ68FE2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atg9aQ68FE2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 AA414768-201ENSMUST00000121924 1257 ntBASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg9aQ68FE2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg9aQ68FE2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.8■□□□□ 0.92
Atg9aQ68FE2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.8■□□□□ 0.92
Atg9aQ68FE2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atg9aQ68FE2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg9aQ68FE2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg9aQ68FE2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Atg9aQ68FE2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atg9aQ68FE2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms