Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VclQ64727 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.04■□□□□ 0.32
VclQ64727 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VclQ64727 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.03■□□□□ 0.32
VclQ64727 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.03■□□□□ 0.32
VclQ64727 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VclQ64727 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VclQ64727 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VclQ64727 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.02■□□□□ 0.32
VclQ64727 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VclQ64727 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VclQ64727 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VclQ64727 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VclQ64727 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VclQ64727 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VclQ64727 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VclQ64727 Gm12085-201ENSMUST00000119263 940 ntBASIC17.02■□□□□ 0.32
VclQ64727 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.02■□□□□ 0.32
VclQ64727 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
VclQ64727 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.02■□□□□ 0.32
VclQ64727 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.02■□□□□ 0.32
VclQ64727 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VclQ64727 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VclQ64727 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
VclQ64727 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VclQ64727 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
VclQ64727 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VclQ64727 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VclQ64727 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.02■□□□□ 0.31
VclQ64727 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VclQ64727 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
VclQ64727 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Gm3375-201ENSMUST00000203929 796 ntBASIC17.01■□□□□ 0.31
VclQ64727 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.01■□□□□ 0.31
VclQ64727 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VclQ64727 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VclQ64727 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Gm8969-201ENSMUST00000199694 526 ntBASIC17■□□□□ 0.31
VclQ64727 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17■□□□□ 0.31
VclQ64727 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17■□□□□ 0.31
VclQ64727 Gm30025-201ENSMUST00000218555 728 ntBASIC17■□□□□ 0.31
VclQ64727 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VclQ64727 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17■□□□□ 0.31
VclQ64727 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
VclQ64727 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VclQ64727 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VclQ64727 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
VclQ64727 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms