Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.43■□□□□ 0.54
Six2Q62232 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Six2Q62232 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.43■□□□□ 0.54
Six2Q62232 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six2Q62232 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six2Q62232 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six2Q62232 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.43■□□□□ 0.54
Six2Q62232 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six2Q62232 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Six2Q62232 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six2Q62232 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six2Q62232 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.43■□□□□ 0.54
Six2Q62232 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six2Q62232 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Six2Q62232 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.42■□□□□ 0.54
Six2Q62232 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Six2Q62232 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.42■□□□□ 0.54
Six2Q62232 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six2Q62232 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.42■□□□□ 0.54
Six2Q62232 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.42■□□□□ 0.54
Six2Q62232 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.42■□□□□ 0.54
Six2Q62232 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six2Q62232 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Six2Q62232 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Six2Q62232 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six2Q62232 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six2Q62232 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Six2Q62232 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.41■□□□□ 0.54
Six2Q62232 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six2Q62232 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six2Q62232 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.41■□□□□ 0.54
Six2Q62232 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six2Q62232 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Six2Q62232 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six2Q62232 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.41■□□□□ 0.54
Six2Q62232 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six2Q62232 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Six2Q62232 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.4■□□□□ 0.54
Six2Q62232 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Six2Q62232 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Six2Q62232 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Six2Q62232 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.4■□□□□ 0.54
Six2Q62232 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six2Q62232 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Six2Q62232 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Six2Q62232 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Six2Q62232 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Six2Q62232 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six2Q62232 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Six2Q62232 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six2Q62232 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.39■□□□□ 0.53
Six2Q62232 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six2Q62232 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six2Q62232 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
Six2Q62232 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Six2Q62232 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six2Q62232 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Six2Q62232 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Six2Q62232 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Six2Q62232 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Mir1199-201ENSMUST00000117015 119 ntBASIC18.38■□□□□ 0.53
Six2Q62232 Gm17661-201ENSMUST00000170317 270 ntBASIC18.38■□□□□ 0.53
Six2Q62232 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.38■□□□□ 0.53
Six2Q62232 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Six2Q62232 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Six2Q62232 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms