Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.43■□□□□ 0.86
Scn9aQ62205 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn9aQ62205 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.42■□□□□ 0.86
Scn9aQ62205 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.42■□□□□ 0.86
Scn9aQ62205 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn9aQ62205 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scn9aQ62205 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Scn9aQ62205 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.42■□□□□ 0.86
Scn9aQ62205 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn9aQ62205 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Gm10052-201ENSMUST00000168019 960 ntBASIC20.41■□□□□ 0.86
Scn9aQ62205 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Gm7729-201ENSMUST00000050143 801 ntBASIC20.41■□□□□ 0.86
Scn9aQ62205 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Scn9aQ62205 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Scn9aQ62205 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn9aQ62205 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn9aQ62205 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn9aQ62205 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn9aQ62205 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Scn9aQ62205 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.4■□□□□ 0.86
Scn9aQ62205 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn9aQ62205 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.4■□□□□ 0.86
Scn9aQ62205 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn9aQ62205 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn9aQ62205 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn9aQ62205 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn9aQ62205 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Scn9aQ62205 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn9aQ62205 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.39■□□□□ 0.85
Scn9aQ62205 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.39■□□□□ 0.85
Scn9aQ62205 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn9aQ62205 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn9aQ62205 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.39■□□□□ 0.85
Scn9aQ62205 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn9aQ62205 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn9aQ62205 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn9aQ62205 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn9aQ62205 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn9aQ62205 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn9aQ62205 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn9aQ62205 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.38■□□□□ 0.85
Scn9aQ62205 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn9aQ62205 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn9aQ62205 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn9aQ62205 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.37■□□□□ 0.85
Scn9aQ62205 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.37■□□□□ 0.85
Scn9aQ62205 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Scn9aQ62205 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn9aQ62205 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Scn9aQ62205 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.37■□□□□ 0.85
Scn9aQ62205 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Scn9aQ62205 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scn9aQ62205 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.37■□□□□ 0.85
Scn9aQ62205 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.36■□□□□ 0.85
Scn9aQ62205 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Scn9aQ62205 Gm11336-201ENSMUST00000118168 334 ntBASIC20.36■□□□□ 0.85
Scn9aQ62205 Gm12644-201ENSMUST00000119935 606 ntBASIC20.36■□□□□ 0.85
Scn9aQ62205 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.36■□□□□ 0.85
Scn9aQ62205 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms