Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.31■□□□□ 0.2
VcanQ62059 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.31■□□□□ 0.2
VcanQ62059 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VcanQ62059 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VcanQ62059 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Gm24513-201ENSMUST00000174964 138 ntBASIC16.3■□□□□ 0.2
VcanQ62059 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.3■□□□□ 0.2
VcanQ62059 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VcanQ62059 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.29■□□□□ 0.2
VcanQ62059 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.29■□□□□ 0.2
VcanQ62059 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VcanQ62059 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.29■□□□□ 0.2
VcanQ62059 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.29■□□□□ 0.2
VcanQ62059 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
VcanQ62059 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.28■□□□□ 0.2
VcanQ62059 Gm26308-201ENSMUST00000157768 69 ntBASIC16.28■□□□□ 0.2
VcanQ62059 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VcanQ62059 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.28■□□□□ 0.2
VcanQ62059 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.28■□□□□ 0.2
VcanQ62059 Chchd1-203ENSMUST00000224633 557 ntBASIC16.28■□□□□ 0.2
VcanQ62059 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VcanQ62059 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VcanQ62059 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VcanQ62059 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.27■□□□□ 0.2
VcanQ62059 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VcanQ62059 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VcanQ62059 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
VcanQ62059 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.27■□□□□ 0.2
VcanQ62059 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VcanQ62059 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VcanQ62059 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VcanQ62059 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.27■□□□□ 0.19
VcanQ62059 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Gm6376-201ENSMUST00000209407 580 ntBASIC16.26■□□□□ 0.19
VcanQ62059 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.26■□□□□ 0.19
VcanQ62059 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.26■□□□□ 0.19
VcanQ62059 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VcanQ62059 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VcanQ62059 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.26■□□□□ 0.19
VcanQ62059 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VcanQ62059 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VcanQ62059 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VcanQ62059 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.25■□□□□ 0.19
VcanQ62059 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VcanQ62059 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.25■□□□□ 0.19
VcanQ62059 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.25■□□□□ 0.19
VcanQ62059 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VcanQ62059 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VcanQ62059 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VcanQ62059 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VcanQ62059 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms