Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
Ctr9Q62018 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.39■□□□□ 0.86
Ctr9Q62018 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ctr9Q62018 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Gm18959-201ENSMUST00000208954 655 ntBASIC20.39■□□□□ 0.85
Ctr9Q62018 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ctr9Q62018 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctr9Q62018 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.39■□□□□ 0.85
Ctr9Q62018 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.38■□□□□ 0.85
Ctr9Q62018 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ctr9Q62018 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Gm2274-201ENSMUST00000184539 609 ntBASIC20.38■□□□□ 0.85
Ctr9Q62018 Gm9731-201ENSMUST00000209480 747 ntBASIC20.38■□□□□ 0.85
Ctr9Q62018 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.38■□□□□ 0.85
Ctr9Q62018 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctr9Q62018 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.37■□□□□ 0.85
Ctr9Q62018 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.37■□□□□ 0.85
Ctr9Q62018 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ctr9Q62018 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Il3ra-202ENSMUST00000223589 738 ntBASIC20.37■□□□□ 0.85
Ctr9Q62018 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.37■□□□□ 0.85
Ctr9Q62018 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
Ctr9Q62018 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Ctr9Q62018 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctr9Q62018 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctr9Q62018 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.36■□□□□ 0.85
Ctr9Q62018 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctr9Q62018 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctr9Q62018 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.36■□□□□ 0.85
Ctr9Q62018 Gm45058-201ENSMUST00000205810 766 ntBASIC20.36■□□□□ 0.85
Ctr9Q62018 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ctr9Q62018 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ctr9Q62018 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctr9Q62018 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ctr9Q62018 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctr9Q62018 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctr9Q62018 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctr9Q62018 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ctr9Q62018 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.35■□□□□ 0.85
Ctr9Q62018 Gm17661-201ENSMUST00000170317 270 ntBASIC20.35■□□□□ 0.85
Ctr9Q62018 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Ctr9Q62018 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.35■□□□□ 0.85
Ctr9Q62018 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctr9Q62018 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.34■□□□□ 0.85
Ctr9Q62018 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Ctr9Q62018 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.34■□□□□ 0.85
Ctr9Q62018 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.34■□□□□ 0.85
Ctr9Q62018 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.34■□□□□ 0.85
Ctr9Q62018 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.34■□□□□ 0.85
Ctr9Q62018 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.34■□□□□ 0.85
Ctr9Q62018 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.34■□□□□ 0.85
Ctr9Q62018 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ctr9Q62018 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms