Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sox17Q61473 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sox17Q61473 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.28■□□□□ 0.2
Sox17Q61473 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.28■□□□□ 0.2
Sox17Q61473 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sox17Q61473 Mir8112-201ENSMUST00000184382 131 ntBASIC16.28■□□□□ 0.2
Sox17Q61473 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox17Q61473 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Sox17Q61473 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sox17Q61473 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox17Q61473 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox17Q61473 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox17Q61473 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox17Q61473 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox17Q61473 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox17Q61473 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox17Q61473 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.27■□□□□ 0.2
Sox17Q61473 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.27■□□□□ 0.2
Sox17Q61473 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox17Q61473 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox17Q61473 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox17Q61473 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox17Q61473 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sox17Q61473 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox17Q61473 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox17Q61473 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox17Q61473 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox17Q61473 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Sox17Q61473 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox17Q61473 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox17Q61473 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox17Q61473 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox17Q61473 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox17Q61473 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox17Q61473 Gm13216-201ENSMUST00000117145 591 ntBASIC16.26■□□□□ 0.19
Sox17Q61473 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.26■□□□□ 0.19
Sox17Q61473 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Sox17Q61473 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox17Q61473 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox17Q61473 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox17Q61473 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sox17Q61473 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sox17Q61473 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.25■□□□□ 0.19
Sox17Q61473 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sox17Q61473 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sox17Q61473 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.25■□□□□ 0.19
Sox17Q61473 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox17Q61473 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.24■□□□□ 0.19
Sox17Q61473 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.24■□□□□ 0.19
Sox17Q61473 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Sox17Q61473 Gm29791-202ENSMUST00000207888 369 ntBASIC16.24■□□□□ 0.19
Sox17Q61473 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Sox17Q61473 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox17Q61473 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox17Q61473 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sox17Q61473 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms