Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift88Q61371 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ift88Q61371 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift88Q61371 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift88Q61371 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ift88Q61371 Mir5133-201ENSMUST00000174955 77 ntBASIC19.19■□□□□ 0.66
Ift88Q61371 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift88Q61371 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift88Q61371 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.19■□□□□ 0.66
Ift88Q61371 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ift88Q61371 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ift88Q61371 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ift88Q61371 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.18■□□□□ 0.66
Ift88Q61371 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.18■□□□□ 0.66
Ift88Q61371 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Ift88Q61371 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ift88Q61371 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.17■□□□□ 0.66
Ift88Q61371 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift88Q61371 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift88Q61371 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift88Q61371 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Ift88Q61371 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift88Q61371 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift88Q61371 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Ift88Q61371 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ift88Q61371 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift88Q61371 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift88Q61371 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift88Q61371 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ift88Q61371 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift88Q61371 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift88Q61371 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ift88Q61371 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ift88Q61371 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ift88Q61371 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ift88Q61371 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.16■□□□□ 0.66
Ift88Q61371 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ift88Q61371 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ift88Q61371 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.16■□□□□ 0.66
Ift88Q61371 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift88Q61371 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift88Q61371 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ift88Q61371 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ift88Q61371 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.15■□□□□ 0.66
Ift88Q61371 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ift88Q61371 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.15■□□□□ 0.66
Ift88Q61371 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.15■□□□□ 0.66
Ift88Q61371 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ift88Q61371 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ift88Q61371 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ift88Q61371 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ift88Q61371 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.15■□□□□ 0.66
Ift88Q61371 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ift88Q61371 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ift88Q61371 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.14■□□□□ 0.65
Ift88Q61371 Gm11643-201ENSMUST00000119578 864 ntBASIC19.14■□□□□ 0.65
Ift88Q61371 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.14■□□□□ 0.65
Ift88Q61371 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.14■□□□□ 0.65
Ift88Q61371 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.14■□□□□ 0.65
Ift88Q61371 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ift88Q61371 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ift88Q61371 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.13■□□□□ 0.65
Ift88Q61371 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ift88Q61371 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ift88Q61371 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Mir6349-201ENSMUST00000184059 97 ntBASIC19.13■□□□□ 0.65
Ift88Q61371 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.13■□□□□ 0.65
Ift88Q61371 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ift88Q61371 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms