Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Six4Q61321 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.46■□□□□ 0.39
Six4Q61321 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.46■□□□□ 0.39
Six4Q61321 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Gm37025-201ENSMUST00000195159 829 ntBASIC17.46■□□□□ 0.39
Six4Q61321 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.46■□□□□ 0.39
Six4Q61321 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six4Q61321 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Six4Q61321 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Six4Q61321 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.45■□□□□ 0.38
Six4Q61321 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six4Q61321 Gm17661-201ENSMUST00000170317 270 ntBASIC17.45■□□□□ 0.38
Six4Q61321 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Six4Q61321 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six4Q61321 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six4Q61321 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Six4Q61321 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six4Q61321 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six4Q61321 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.45■□□□□ 0.38
Six4Q61321 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six4Q61321 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Six4Q61321 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six4Q61321 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.44■□□□□ 0.38
Six4Q61321 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Mir6982-201ENSMUST00000184354 68 ntBASIC17.44■□□□□ 0.38
Six4Q61321 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.44■□□□□ 0.38
Six4Q61321 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.44■□□□□ 0.38
Six4Q61321 Gm7791-201ENSMUST00000219066 539 ntBASIC17.44■□□□□ 0.38
Six4Q61321 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.44■□□□□ 0.38
Six4Q61321 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Six4Q61321 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six4Q61321 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.44■□□□□ 0.38
Six4Q61321 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.43■□□□□ 0.38
Six4Q61321 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.43■□□□□ 0.38
Six4Q61321 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Six4Q61321 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.43■□□□□ 0.38
Six4Q61321 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.43■□□□□ 0.38
Six4Q61321 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.43■□□□□ 0.38
Six4Q61321 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Six4Q61321 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Gm9731-201ENSMUST00000209480 747 ntBASIC17.43■□□□□ 0.38
Six4Q61321 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Six4Q61321 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six4Q61321 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Six4Q61321 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Six4Q61321 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Six4Q61321 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.42■□□□□ 0.38
Six4Q61321 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six4Q61321 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms