Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scnn1aQ61180 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scnn1aQ61180 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scnn1aQ61180 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Scnn1aQ61180 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Scnn1aQ61180 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scnn1aQ61180 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scnn1aQ61180 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scnn1aQ61180 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Scnn1aQ61180 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.91■□□□□ 0.78
Scnn1aQ61180 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Gm10819-201ENSMUST00000099988 561 ntBASIC19.91■□□□□ 0.78
Scnn1aQ61180 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scnn1aQ61180 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.9■□□□□ 0.78
Scnn1aQ61180 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scnn1aQ61180 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.89■□□□□ 0.77
Scnn1aQ61180 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Gm27000-201ENSMUST00000182943 842 ntBASIC19.89■□□□□ 0.77
Scnn1aQ61180 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.89■□□□□ 0.77
Scnn1aQ61180 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scnn1aQ61180 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Gm8969-201ENSMUST00000199694 526 ntBASIC19.88■□□□□ 0.77
Scnn1aQ61180 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scnn1aQ61180 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms