Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Ptch1Q61115 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Ptch1Q61115 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ptch1Q61115 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Ptch1Q61115 Gm5784-201ENSMUST00000179344 2478 ntBASIC25.01■■□□□ 1.59
Ptch1Q61115 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ptch1Q61115 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC25.01■■□□□ 1.59
Ptch1Q61115 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ptch1Q61115 Gm5264-201ENSMUST00000190584 848 ntBASIC25.01■■□□□ 1.59
Ptch1Q61115 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ptch1Q61115 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ptch1Q61115 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ptch1Q61115 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Ptch1Q61115 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ptch1Q61115 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ptch1Q61115 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC25■■□□□ 1.59
Ptch1Q61115 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC25■■□□□ 1.59
Ptch1Q61115 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ptch1Q61115 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ptch1Q61115 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ptch1Q61115 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC24.99■■□□□ 1.59
Ptch1Q61115 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Ptch1Q61115 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC24.99■■□□□ 1.59
Ptch1Q61115 Gm13312-201ENSMUST00000119631 718 ntBASIC24.99■■□□□ 1.59
Ptch1Q61115 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
Ptch1Q61115 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
Ptch1Q61115 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ptch1Q61115 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ptch1Q61115 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Ptch1Q61115 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ptch1Q61115 Gm6190-201ENSMUST00000220683 1374 ntBASIC24.98■■□□□ 1.59
Ptch1Q61115 Gm43575-201ENSMUST00000196420 516 ntBASIC24.98■■□□□ 1.59
Ptch1Q61115 Gm2213-201ENSMUST00000197485 688 ntBASIC24.98■■□□□ 1.59
Ptch1Q61115 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ptch1Q61115 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ptch1Q61115 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
Ptch1Q61115 AC159093.1-201ENSMUST00000227779 380 ntBASIC24.98■■□□□ 1.59
Ptch1Q61115 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ptch1Q61115 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ptch1Q61115 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ptch1Q61115 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ptch1Q61115 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Ptch1Q61115 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
Ptch1Q61115 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Ptch1Q61115 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
Ptch1Q61115 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptch1Q61115 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptch1Q61115 Rprl3-201ENSMUST00000157400 290 ntBASIC24.96■■□□□ 1.59
Ptch1Q61115 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ptch1Q61115 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptch1Q61115 Gm13830-205ENSMUST00000201195 1155 ntBASIC24.96■■□□□ 1.59
Ptch1Q61115 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptch1Q61115 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptch1Q61115 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
Ptch1Q61115 Gm43545-201ENSMUST00000196765 2779 ntBASIC24.96■■□□□ 1.59
Ptch1Q61115 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC24.95■■□□□ 1.59
Ptch1Q61115 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC24.95■■□□□ 1.59
Ptch1Q61115 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ptch1Q61115 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ptch1Q61115 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptch1Q61115 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptch1Q61115 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC24.95■■□□□ 1.58
Ptch1Q61115 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ptch1Q61115 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC24.95■■□□□ 1.58
Ptch1Q61115 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC24.95■■□□□ 1.58
Ptch1Q61115 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptch1Q61115 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptch1Q61115 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ptch1Q61115 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC24.94■■□□□ 1.58
Ptch1Q61115 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Ptch1Q61115 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.58
Ptch1Q61115 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ptch1Q61115 Gm23935-201ENSMUST00000102303 57 ntBASIC24.94■■□□□ 1.58
Ptch1Q61115 Gm24270-201ENSMUST00000102326 57 ntBASIC24.94■■□□□ 1.58
Ptch1Q61115 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Ptch1Q61115 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Ptch1Q61115 Gm15165-201ENSMUST00000118140 502 ntBASIC24.94■■□□□ 1.58
Ptch1Q61115 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Ptch1Q61115 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms