Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ctc1Q5SUQ9 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ctc1Q5SUQ9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ctc1Q5SUQ9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.33■□□□□ 0.52
Ctc1Q5SUQ9 Gm30025-201ENSMUST00000218555 728 ntBASIC18.33■□□□□ 0.52
Ctc1Q5SUQ9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctc1Q5SUQ9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ctc1Q5SUQ9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctc1Q5SUQ9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ctc1Q5SUQ9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ctc1Q5SUQ9 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctc1Q5SUQ9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.31■□□□□ 0.52
Ctc1Q5SUQ9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Mir6349-201ENSMUST00000184059 97 ntBASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctc1Q5SUQ9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Ctc1Q5SUQ9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Gm18025-201ENSMUST00000221733 862 ntBASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Odf3b-204ENSMUST00000227834 930 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms