Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps54Q5SPW0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps54Q5SPW0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.79■□□□□ 0.92
Vps54Q5SPW0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps54Q5SPW0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Gm13836-201ENSMUST00000121159 501 ntBASIC20.77■□□□□ 0.92
Vps54Q5SPW0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Il3ra-202ENSMUST00000223589 738 ntBASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps54Q5SPW0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vps54Q5SPW0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vps54Q5SPW0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Vps54Q5SPW0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vps54Q5SPW0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vps54Q5SPW0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vps54Q5SPW0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Gm10231-201ENSMUST00000181584 441 ntBASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Gm10175-202ENSMUST00000208752 441 ntBASIC20.76■□□□□ 0.91
Vps54Q5SPW0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vps54Q5SPW0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.75■□□□□ 0.91
Vps54Q5SPW0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps54Q5SPW0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms