Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav8d-2Q5R1B6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-2Q5R1B6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Gm11336-201ENSMUST00000118168 334 ntBASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav8d-2Q5R1B6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav8d-2Q5R1B6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Trav8d-2Q5R1B6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav8d-2Q5R1B6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trav8d-2Q5R1B6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-2Q5R1B6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Gm15372-201ENSMUST00000120729 834 ntBASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Gm18206-201ENSMUST00000207027 926 ntBASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-2Q5R1B6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms