Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.78■□□□□ 0.28
Col27a1Q5QNQ9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col27a1Q5QNQ9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col27a1Q5QNQ9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col27a1Q5QNQ9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col27a1Q5QNQ9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Gm14494-201ENSMUST00000118786 435 ntBASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Auts2-212ENSMUST00000178555 309 ntBASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col27a1Q5QNQ9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Gm10576-201ENSMUST00000191927 825 ntBASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col27a1Q5QNQ9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col27a1Q5QNQ9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Gm25990-201ENSMUST00000102440 86 ntBASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Gm14822-201ENSMUST00000122247 291 ntBASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.74■□□□□ 0.27
Col27a1Q5QNQ9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Gm13036-201ENSMUST00000117799 748 ntBASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Gm25911-201ENSMUST00000157621 56 ntBASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col27a1Q5QNQ9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms