Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Gm6345-202ENSMUST00000180900 204 ntBASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Gm10566-201ENSMUST00000086739 996 ntBASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.99■□□□□ 0.79
Rc3h1Q4VGL6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Gm7213-201ENSMUST00000215977 950 ntBASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h1Q4VGL6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.97■□□□□ 0.79
Rc3h1Q4VGL6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 AA414768-201ENSMUST00000121924 1257 ntBASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Gm21559-201ENSMUST00000220638 855 ntBASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Gm8587-201ENSMUST00000076538 843 ntBASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h1Q4VGL6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Mir1668-201ENSMUST00000184114 107 ntBASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rc3h1Q4VGL6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms