Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Rncr4-201ENSMUST00000194541 2234 ntBASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc2Q4U2R1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Gm10355-201ENSMUST00000097146 517 ntBASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.33□□□□□ -0.76
Herc2Q4U2R1 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.33□□□□□ -0.76
Herc2Q4U2R1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Gm2423-201ENSMUST00000074863 733 ntBASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Herc2Q4U2R1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Herc2Q4U2R1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms