Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm29609Q3UU56 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm29609Q3UU56 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Gm18032-201ENSMUST00000222541 538 ntBASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm29609Q3UU56 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Gm38285-201ENSMUST00000192928 922 ntBASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Odf3b-204ENSMUST00000227834 930 ntBASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.11■□□□□ 0.49
Gm29609Q3UU56 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm29609Q3UU56 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm29609Q3UU56 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm29609Q3UU56 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm29609Q3UU56 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm29609Q3UU56 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm29609Q3UU56 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm29609Q3UU56 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm29609Q3UU56 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms