Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl5Q3UTQ8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl5Q3UTQ8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Gm24841-201ENSMUST00000158676 357 ntBASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl5Q3UTQ8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl5Q3UTQ8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cdkl5Q3UTQ8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdkl5Q3UTQ8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl5Q3UTQ8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Gm27011-201ENSMUST00000182352 972 ntBASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl5Q3UTQ8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms