Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28047Q3US59 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28047Q3US59 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.73■□□□□ 0.75
Gm28047Q3US59 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28047Q3US59 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28047Q3US59 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.73■□□□□ 0.75
Gm28047Q3US59 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Trmt13-210ENSMUST00000198454 880 ntBASIC19.72■□□□□ 0.75
Gm28047Q3US59 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Gm4974-201ENSMUST00000209974 875 ntBASIC19.72■□□□□ 0.75
Gm28047Q3US59 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28047Q3US59 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.71■□□□□ 0.75
Gm28047Q3US59 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28047Q3US59 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28047Q3US59 Gm12382-201ENSMUST00000122005 922 ntBASIC19.7■□□□□ 0.74
Gm28047Q3US59 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.7■□□□□ 0.74
Gm28047Q3US59 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28047Q3US59 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gm28047Q3US59 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm28047Q3US59 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28047Q3US59 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28047Q3US59 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28047Q3US59 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.69■□□□□ 0.74
Gm28047Q3US59 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28047Q3US59 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.68■□□□□ 0.74
Gm28047Q3US59 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28047Q3US59 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28047Q3US59 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.68■□□□□ 0.74
Gm28047Q3US59 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Gm28047Q3US59 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28047Q3US59 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28047Q3US59 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28047Q3US59 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28047Q3US59 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28047Q3US59 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Gm10517-202ENSMUST00000192970 758 ntBASIC19.67■□□□□ 0.74
Gm28047Q3US59 Gm43183-201ENSMUST00000200632 547 ntBASIC19.67■□□□□ 0.74
Gm28047Q3US59 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28047Q3US59 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28047Q3US59 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms