Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx27Q3UHD6 Gm18958-201ENSMUST00000174258 762 ntBASIC18.7■□□□□ 0.58
Snx27Q3UHD6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx27Q3UHD6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Snx27Q3UHD6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Snx27Q3UHD6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Snx27Q3UHD6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx27Q3UHD6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx27Q3UHD6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx27Q3UHD6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Gm10566-201ENSMUST00000086739 996 ntBASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx27Q3UHD6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.68■□□□□ 0.58
Snx27Q3UHD6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Gm21362-201ENSMUST00000194272 928 ntBASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx27Q3UHD6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Gm33142-201ENSMUST00000193913 867 ntBASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.66■□□□□ 0.58
Snx27Q3UHD6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Actl10-202ENSMUST00000226583 1501 ntBASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx27Q3UHD6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms