Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrk1Q3UHC2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrk1Q3UHC2 Gm27463-201ENSMUST00000183569 57 ntBASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrk1Q3UHC2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Gm18959-201ENSMUST00000208954 655 ntBASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Il3ra-202ENSMUST00000223589 738 ntBASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrk1Q3UHC2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrk1Q3UHC2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Gm23634-201ENSMUST00000175071 91 ntBASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrrk1Q3UHC2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Lrrk1Q3UHC2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms