Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Gm15165-201ENSMUST00000118140 502 ntBASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vars2Q3U2A8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Auts2-212ENSMUST00000178555 309 ntBASIC21.55■■□□□ 1.04
Vars2Q3U2A8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.55■■□□□ 1.04
Vars2Q3U2A8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vars2Q3U2A8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Gm24513-201ENSMUST00000174964 138 ntBASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vars2Q3U2A8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Gm27397-201ENSMUST00000184997 107 ntBASIC21.52■■□□□ 1.04
Vars2Q3U2A8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vars2Q3U2A8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Vars2Q3U2A8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Phf7-203ENSMUST00000226565 1971 ntBASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Gm4995-201ENSMUST00000117247 432 ntBASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vars2Q3U2A8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vars2Q3U2A8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms